Journal

Mechanistic evidence that motif-gated domain recognition drives contact prediction in protein language models
Jatin Nainani, Bryn Marie Reimer, Connor Watts, David Jensen, Anna G. Green
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Transcriptomic responses to antibiotic exposure in Mycobacterium tuberculosis
Husain Poonawala, Yu Zhang, Sravya Kuchibotla, Anna G. Green, Daniela Maria Cirillo, Federico Di Marco, Andrea Spitlaeri, Paolo Miotto, Maha R. Farhat
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Analysis of Genome-Wide Mutational Dependence in Naturally Evolving Mycobacterium tuberculosis Populations
Anna G. Green, Roger Vargas Jr, Maximillian G. Marin, Luca Freschi, Jiaqi Xie, Maha R. Farhat
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A convolutional neural network highlights mutations relevant to antimicrobial resistance in Mycobacterium tuberculosis
Anna G. Green, Chang Ho Yoon, Michael L. Chen, Yasha Ektefaie, Mack Fina, Luca Freschi, Matthias I. Groeschel, Isaac Kohane, Andrew Beam, Maha R. Farhat
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